Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs71490861 | chr10:63422876 | A/G | 0 | 207 | 18.25 | 9 | 3.93 | KM Plot |
| KIRP | rs71490864 | chr10:63440579 | C/T | 0 | 213 | 18 | 9.65 | 3.38 | KM Plot |
| KIRP | rs71507180 | chr10:63422998 | C/A | 0 | 208 | 18.03 | 6.83 | 3.93 | KM Plot |
| KIRP | rs71507184 | chr10:63456304 | G/A | 0 | 213 | 18.02 | 6.83 | 3.38 | KM Plot |
| KIRP | rs71507188 | chr10:63481338 | A/G | 0 | 212 | 18.02 | 6.2 | 3.38 | KM Plot |
| KIRP | rs7152658 | chr14:50502043 | A/G | 0.000231 | 214 | 9.92 | 16.43 | 17 | KM Plot |
| KIRP | rs7153128 | chr14:20911055 | A/T | 0.000236 | 214 | 9.25 | 19.87 | 14.47 | KM Plot |
| KIRP | rs71537559 | chr6:27309779 | G/C | 8.35E-7 | 214 | 17.13 | 12 | 7.32 | KM Plot |
| KIRP | rs71537572 | chr6:27970715 | T/C | 4.74E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs71546588 | chr6:27971449 | GC/G | 4.74E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs71546598 | chr6:28072877 | CCGACCTGGT/C | 2.3E-7 | 212 | 15.88 | 16.43 | 9.77 | KM Plot |
| KIRP | rs71557332 | chr6:26356853 | C/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs71557334 | chr6:26365913 | G/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs71559024 | chr6:27352750 | G/A | 1.25E-6 | 213 | 17.13 | 11.58 | 7.32 | KM Plot |
| KIRP | rs71559038 | chr6:27640989 | A/G | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |